Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015842268.1_cds_XP_016508324.1_21355
CDS Infomation

[gene=LOC107825915] [db_xref=GeneID:107825915] [protein=zinc finger CCCH domain-containing protein 53-like isoform X2] [protein_id=XP_016508324.1] [location=complement(join(6967..7165,7378..7525,7601..7807,7889..7953,8046..8225,8314..8496,9460..10262))] [gbkey=CDS]
Sequence

ATGGATACATATGAAGCAACAAAGACAGTTTTGTCAAGAATCCAAAGTTTGGATCCAGAA
AATGCTTCAAAAATCATGGGTTATATACTAATACAAGACCAAGGAGATAAGGAGATGATA
AGGCTAGCATTTGGTCCAGAAACTTTGTTAATCTCTCTCATTAACCAAGTAAAAAATCGT
TTAGGACTTTCATCGAACAGTTCATCTGCACCATCAACACCTTCATCTCCTTCGCCGTTT
ATTCCCGTTCCAAACCCCATTAAATTCAACCCGTTTCCCCATTCATCACCAAGAATCATT
ATACCAAACAATGGGTTTCAATCTTTGCCTTCATCTCCTTGGTCTGGTGGGTCCCCAGTG
TTTTCAAGAAGTCCAAGACCAGTGTCATATGCTACTGTAGTGAATGGTCCAAACTCAAAT
ACTGCTTCTGGCTCTTCAGATTCTTCTTTATCACTACCTTTTTTCGAGCCAACTGATGAA
TATTGCAATATTCAATTTCAAGATCAGTTGTCATTTCTAAATGAGTCGTTTCTTGAGGAA
AACAGTAATCAAAATGATGTTTTTCTTGGTAGGTCCCATGATGATAATAATGGGGGTTTT
GGTGATTGGAAGCCTTGCATGTATTATGCAAAAGGATTTTGCAAGAATGGAAATAGTTGT
AAGTTTCTGCATGGTGGATTTGGGGAGGAAAATACTCCTAGCAATGTTGATTATTTTGAT
GAGATTTTGCGTGTGAAAGCTTTACAGCAACGGCAGAGATTTATGGCTTCTGGTCATCAT
CATCATCCATTTGGTTACAACAGATCGGCGGCAGCAGCATTAATGACAAGTGATGAGTTC
TACAAATATGGTCGGTCCCTACCTGACAGAAATGAATTTTCAGCAATGGCGCTAGGTGGA
ATTTCAAATTCTAGTTCGAGACAGATTTACTTGACATTTCCTGCCGATAGCACATTTAAG
GAGGAGGATGTGTCTAATTACTTTAGTATGTATGGCCCGGTGCAAGACGTTAGAATTCCA
TATCAGCAGAAGCGAATGTTTGGATTTGTTACATTCGTCTATCCAGAAACCGTGAAGATT
ATCTTGGCCAAAGGGAACCCTCATTTTGTGTGTGATTCTCGCGTGCTTGTTAAACCATAC
AAAGAAAAGGGAAAATTCCCAGACAAGAAGCAATTTCAGCAACAGCAGCAGCCTATTGAT
AGAGGAGAGCTCGAGTCGGGGGAGCTCTATGGAGCAAGGATGTTTCATAATTCGCACGAG
ATAATGTTGAGAAGAAAAATAGAGCATGATGCTGAGTTGCAGCAAGCAATTGAGCTTCAA
GGCATAAGGTTAATGAATTTGCAACTGATGAAGAACCATCACAATAATCACTTCCAACCC
AGCCTCTCTCCGGGTGTTTTTTGTTCTTTTAATGGCATCAACCAAGAAGTCTTAGCAGAA
AACAAAGGTTTCCAGGAACCCACCGAGCCCCCATCTGATGCAGCCGATGAGAAGGTACCT
CAGGAGCTGCTACATACAAATAATGGAAATGGAGGTTCCAATAAGGAGCAGACCTCGAAT
ACCGATGATTCGTATCCTCGAGAAAGCTTGGAGCACATCCTTCCTGATAACCTATTTGCT
TCTCCCACGAAATTGGTTACGGAACAACATTTCGGGTTTTCCATTGATTCAGCTGAAGCT
GACATTAGTTCCGCGATGACAACGCCAGCAACAACAACAACAATAACTACTAACAGCGTC
CCTATGCCTCCTGCCACTTCTGCTCTTCAACATTACGTCTCTTAA

Peptide Sequence

PEP ID

XP_016508324.1
PEP Infomation

PREDICTED: zinc finger CCCH domain-containing protein 53-like isoform X2 [Nicotiana tabacum]
Sequence

MDTYEATKTVLSRIQSLDPENASKIMGYILIQDQGDKEMIRLAFGPETLLISLINQVKNR
LGLSSNSSSAPSTPSSPSPFIPVPNPIKFNPFPHSSPRIIIPNNGFQSLPSSPWSGGSPV
FSRSPRPVSYATVVNGPNSNTASGSSDSSLSLPFFEPTDEYCNIQFQDQLSFLNESFLEE
NSNQNDVFLGRSHDDNNGGFGDWKPCMYYAKGFCKNGNSCKFLHGGFGEENTPSNVDYFD
EILRVKALQQRQRFMASGHHHHPFGYNRSAAAALMTSDEFYKYGRSLPDRNEFSAMALGG
ISNSSSRQIYLTFPADSTFKEEDVSNYFSMYGPVQDVRIPYQQKRMFGFVTFVYPETVKI
ILAKGNPHFVCDSRVLVKPYKEKGKFPDKKQFQQQQQPIDRGELESGELYGARMFHNSHE
IMLRRKIEHDAELQQAIELQGIRLMNLQLMKNHHNNHFQPSLSPGVFCSFNGINQEVLAE
NKGFQEPTEPPSDAADEKVPQELLHTNNGNGGSNKEQTSNTDDSYPRESLEHILPDNLFA
SPTKLVTEQHFGFSIDSAEADISSAMTTPATTTTITTNSVPMPPATSALQHYVS

Transcript Sequence

Gene sequence data has not been registered.